Raptor
3.0.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
- b -
bin_indices_of_ibf() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
bulk_contains() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
bulk_contains_impl() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
bulk_count() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
bulk_count_impl() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
- c -
compute_fp_correction() :
raptor::hibf::build_data< data_layout_mode >
counting_agent() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
counting_agent_type() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
- f -
filename_index() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
filename_of_user_bin() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
forward_strand_minimiser() :
raptor::threshold::forward_strand_minimiser
- h -
hierarchical_interleaved_bloom_filter() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
- l -
load_old_index() :
raptor::raptor_index< data_t >
load_old_parameters() :
raptor::raptor_index< data_t >
- m -
membership_agent() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
membership_agent_type() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
- n -
num_user_bins() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
- o -
operator=() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
,
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
,
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
,
raptor::threshold::forward_strand_minimiser
operator[]() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
- r -
resize() :
raptor::threshold::forward_strand_minimiser
- s -
serialize() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
,
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
,
raptor::raptor_index< data_t >
set_ibf_count() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
set_user_bin_count() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
- w -
write_filenames() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
- ~ -
~counting_agent_type() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
~forward_strand_minimiser() :
raptor::threshold::forward_strand_minimiser
~hierarchical_interleaved_bloom_filter() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
~membership_agent_type() :
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
Generated on Sat Sep 2 2023 05:20:46 for Raptor by
1.9.4